
   20-Dec-2020 14:38:30 +0100

rootdir = ..\201118_DoreenBob_HumanBlood3\
sampleName = H05_8nlps_Warm
measNums = 10 11 1 2 3 4 5 6 7 8 9 
frameNums = 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 
pixSizeReal = 0.34
pixSizeRec = 0.34
exportMatName = _data_export
firstImageBeforeChannelBegin = 1
lastImageAfterChannelEnd = 1
createResultSubDir = 1
writeStatImages = 1
writeImages = 0
enableFlag = 0
areaRatioFilterLevel = 0.7
areaRatioMax = 1.2
Converting 'M10_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 475 cell sequences
cell traces covers the whole channel: 375 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 56
write results (319 cells):
----------
----------
319 cells written
Converting 'M11_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 486 cell sequences
cell traces covers the whole channel: 389 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 53
write results (336 cells):
----------
----------
336 cells written
Converting 'M1_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 295 cell sequences
cell traces covers the whole channel: 227 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 28
write results (199 cells):
----------
----------
199 cells written
Converting 'M2_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 438 cell sequences
cell traces covers the whole channel: 362 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 39
write results (323 cells):
----------
----------
323 cells written
Converting 'M3_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 514 cell sequences
cell traces covers the whole channel: 421 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 43
write results (378 cells):
----------
----------
378 cells written
Converting 'M4_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 512 cell sequences
cell traces covers the whole channel: 417 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 56
write results (361 cells):
----------
----------
361 cells written
Converting 'M5_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 509 cell sequences
cell traces covers the whole channel: 410 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 68
write results (342 cells):
----------
----------
342 cells written
Converting 'M6_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 556 cell sequences
cell traces covers the whole channel: 446 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 67
write results (379 cells):
----------
----------
379 cells written
Converting 'M7_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 588 cell sequences
cell traces covers the whole channel: 463 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 67
write results (396 cells):
----------
----------
396 cells written
Converting 'M8_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 504 cell sequences
cell traces covers the whole channel: 388 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 68
write results (320 cells):
----------
----------
320 cells written
Converting 'M9_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 469 cell sequences
cell traces covers the whole channel: 362 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
[Warning: Directory already exists.] 
[> In <a href="matlab:matlab.internal.language.introspective.errorDocCallback('CellPosDeformEval41', 'Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m', 211)" style="font-weight:bold">CellPosDeformEval41</a> (<a href="matlab: opentoline('Z:\ZIK-BioMech1\dRT-DC\00_analysis\CellPosDeformEval41.m',211,0)">line 211</a>)] 
filter for area ratio: excluded cells: 54
write results (308 cells):
----------
----------
308 cells written
measurement: ..\201118_DoreenBob_HumanBlood3\H05_8nlps_Warm\Online\
cell counts:
M#	Th	wholeChannel	areaRatio	written
10	475	375	319	319
11	486	389	336	336
1	295	227	199	199
2	438	362	323	323
3	514	421	378	378
4	512	417	361	361
5	509	410	342	342
6	556	446	379	379
7	588	463	396	396
8	504	388	320	320
9	469	362	308	308

   9-Mar-2022 22:48:37 +0100

rootdir = ..\201118_DoreenBob_HumanBlood3\
sampleName = 201118_H05_8nlps_Warm
measNums = 10 11 1 2 3 4 5 6 7 8 9 
frameNums = 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 3000 
pixSizeReal = 0.34
pixSizeRec = 0.34
exportMatName = _data_export
firstImageBeforeChannelBegin = 1
lastImageAfterChannelEnd = 1
createResultSubDir = 1
writeStatImages = 1
writeImages = 0
enableFlag = 0
areaRatioFilterLevel = 0.7
areaRatioMax = 1.2
Converting 'M10_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 475 cell sequences
cell traces covers the whole channel: 375 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 56
write results (319 cells):
----------
----------
319 cells written
Converting 'M11_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 486 cell sequences
cell traces covers the whole channel: 389 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 53
write results (336 cells):
----------
----------
336 cells written
Converting 'M1_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 295 cell sequences
cell traces covers the whole channel: 227 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 28
write results (199 cells):
----------
----------
199 cells written
Converting 'M2_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 438 cell sequences
cell traces covers the whole channel: 362 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 39
write results (323 cells):
----------
----------
323 cells written
Converting 'M3_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 514 cell sequences
cell traces covers the whole channel: 421 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 43
write results (378 cells):
----------
----------
378 cells written
Converting 'M4_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 512 cell sequences
cell traces covers the whole channel: 417 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 56
write results (361 cells):
----------
----------
361 cells written
Converting 'M5_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 509 cell sequences
cell traces covers the whole channel: 410 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 68
write results (342 cells):
----------
----------
342 cells written
Converting 'M6_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 556 cell sequences
cell traces covers the whole channel: 446 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 67
write results (379 cells):
----------
----------
379 cells written
Converting 'M7_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 588 cell sequences
cell traces covers the whole channel: 463 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 67
write results (396 cells):
----------
----------
396 cells written
Converting 'M8_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 504 cell sequences
cell traces covers the whole channel: 388 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 68
write results (320 cells):
----------
----------
320 cells written
Converting 'M9_2us_70A_0.008000ul_s.tdms'... Conversion complete.
min. 10 cells per sequence: 469 cell sequences
cell traces covers the whole channel: 362 cell sequences
load video
load contours
... and calculate Lambda ratio, volume, surface area
filter for area ratio: excluded cells: 54
write results (308 cells):
----------
----------
308 cells written
measurement: ..\201118_DoreenBob_HumanBlood3\201118_H05_8nlps_Warm\Online\
cell counts:
M#	Th	wholeChannel	areaRatio	written
10	475	375	319	319
11	486	389	336	336
1	295	227	199	199
2	438	362	323	323
3	514	421	378	378
4	512	417	361	361
5	509	410	342	342
6	556	446	379	379
7	588	463	396	396
8	504	388	320	320
9	469	362	308	308
